Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRBV5-4A0A0C4DH59 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 BNIP3P1-202ENST00000550043 1585 ntBASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 AL133215.2-201ENST00000609242 977 ntBASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV5-4A0A0C4DH59 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV5-4A0A0C4DH59 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV5-4A0A0C4DH59 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV5-4A0A0C4DH59 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV5-4A0A0C4DH59 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.96■□□□□ 0.14
TRBV5-4A0A0C4DH59 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 MIR4453-201ENST00000584019 89 ntBASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 AC015911.4-201ENST00000588022 1070 ntBASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 AC003101.2-201ENST00000612557 442 ntBASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 MIR6080-201ENST00000617359 66 ntBASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 AL035456.1-201ENST00000456064 1369 ntBASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV5-4A0A0C4DH59 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms