Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 AC090340.1-201ENST00000620778 4980 ntBASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCH2Q9Y6C5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PTCH2Q9Y6C5 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 INTS4P2-202ENST00000614726 2019 ntBASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 SOCS2P1-201ENST00000417727 557 ntBASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 MPRIPP1-201ENST00000452433 1089 ntBASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 CLUHP6-201ENST00000580789 941 ntBASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 AL049840.4-201ENST00000602422 811 ntBASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 AC134312.5-201ENST00000568031 1313 ntBASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCH2Q9Y6C5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 RPL13P2-201ENST00000440687 659 ntBASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 AC012441.1-201ENST00000446669 685 ntBASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 AC124947.2-201ENST00000547118 1133 ntBASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 AC105129.2-201ENST00000559536 390 ntBASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCH2Q9Y6C5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTCH2Q9Y6C5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms