Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 BX640515.1-201ENST00000617215 977 ntBASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 REXO1L8P-201ENST00000604378 1897 ntBASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 BCAR1-209ENST00000546196 1340 ntBASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PCDHGA11Q9Y5H2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 AL121894.2-201ENST00000602977 491 ntBASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 AC005622.1-201ENST00000636801 1703 ntBASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PCDHGA11Q9Y5H2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 C8orf49-201ENST00000525043 1968 ntBASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AC092474.2-201ENST00000424288 719 ntBASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AC007967.2-201ENST00000432613 625 ntBASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AL591424.1-201ENST00000442569 1213 ntBASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHGA11Q9Y5H2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms