Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ZC3H4Q9UPT8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 AL008638.5-201ENST00000623814 1298 ntBASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 INTS4P2-202ENST00000614726 2019 ntBASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 AL607033.1-201ENST00000623900 1599 ntBASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZC3H4Q9UPT8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 MIR326-201ENST00000362220 95 ntBASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 FAM86LP-201ENST00000478302 853 ntBASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 AL671710.1-201ENST00000610245 2349 ntBASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.53■□□□□ 0.72
ZC3H4Q9UPT8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 HINT2P1-201ENST00000419438 481 ntBASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 AC004898.1-201ENST00000451057 766 ntBASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 Z93015.1-201ENST00000451718 390 ntBASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 AC023310.1-201ENST00000554836 735 ntBASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZC3H4Q9UPT8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms