Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF41Q9H4P4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 CYP2T1P-202ENST00000641596 2535 ntBASIC19.18■□□□□ 0.66
RNF41Q9H4P4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 KLF2P3-201ENST00000451977 1087 ntBASIC19.18■□□□□ 0.66
RNF41Q9H4P4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AC051619.7-201ENST00000568314 623 ntBASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AC105021.1-202ENST00000570572 669 ntBASIC19.18■□□□□ 0.66
RNF41Q9H4P4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF41Q9H4P4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 AL596087.1-201ENST00000400979 1969 ntBASIC19.17■□□□□ 0.66
RNF41Q9H4P4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 MIR648-201ENST00000385046 94 ntBASIC19.17■□□□□ 0.66
RNF41Q9H4P4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 AL139010.1-201ENST00000454878 894 ntBASIC19.17■□□□□ 0.66
RNF41Q9H4P4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 AC125807.1-201ENST00000483097 614 ntBASIC19.17■□□□□ 0.66
RNF41Q9H4P4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF41Q9H4P4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms