Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 SSR4P1-203ENST00000599569 2260 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 AC136621.1-201ENST00000624017 2304 ntBASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 RHOQP3-201ENST00000437982 621 ntBASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TUBB1Q9H4B7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 HAUS4P1-201ENST00000406739 1145 ntBASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 AC092474.2-201ENST00000424288 719 ntBASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 AC096734.2-201ENST00000562054 433 ntBASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TUBB1Q9H4B7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TUBB1Q9H4B7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
TUBB1Q9H4B7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TUBB1Q9H4B7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TUBB1Q9H4B7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
TUBB1Q9H4B7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TUBB1Q9H4B7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms