Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 MIR1908-201ENST00000410394 80 ntBASIC17.71■□□□□ 0.43
HIPK3Q9H422 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 AL136982.4-201ENST00000437689 1740 ntBASIC17.71■□□□□ 0.43
HIPK3Q9H422 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 AC093525.8-201ENST00000624099 1342 ntBASIC17.71■□□□□ 0.42
HIPK3Q9H422 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.71■□□□□ 0.42
HIPK3Q9H422 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 AL645728.1-201ENST00000366221 2101 ntBASIC17.7■□□□□ 0.42
HIPK3Q9H422 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 AL162726.2-201ENST00000438986 1017 ntBASIC17.7■□□□□ 0.42
HIPK3Q9H422 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 AC036164.1-201ENST00000570544 333 ntBASIC17.7■□□□□ 0.42
HIPK3Q9H422 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 MIR6869-201ENST00000619434 62 ntBASIC17.7■□□□□ 0.42
HIPK3Q9H422 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.7■□□□□ 0.42
HIPK3Q9H422 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 KRT8P22-201ENST00000562317 1415 ntBASIC17.7■□□□□ 0.42
HIPK3Q9H422 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIPK3Q9H422 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.7■□□□□ 0.42
HIPK3Q9H422 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 AC133539.2-201ENST00000604757 467 ntBASIC17.69■□□□□ 0.42
HIPK3Q9H422 CU634019.7-201ENST00000624153 1185 ntBASIC17.69■□□□□ 0.42
HIPK3Q9H422 FP236241.2-201ENST00000624906 1185 ntBASIC17.69■□□□□ 0.42
HIPK3Q9H422 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.69■□□□□ 0.42
HIPK3Q9H422 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIPK3Q9H422 TNRC18P3-201ENST00000441896 2691 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms