Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 AC004945.1-201ENST00000416738 983 ntBASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 RPL13AP20-201ENST00000459725 609 ntBASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 HNRNPUP1-201ENST00000554987 333 ntBASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 C2orf69P2-201ENST00000562032 1123 ntBASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 AC243960.2-201ENST00000600996 747 ntBASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 AC008687.7-202ENST00000637404 953 ntBASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CNTNAP4Q9C0A0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 GOLGA2P4-201ENST00000441462 777 ntBASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNTNAP4Q9C0A0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.2■□□□□ 0.83
CNTNAP4Q9C0A0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 AC022137.2-201ENST00000503482 481 ntBASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 RN7SL560P-201ENST00000577943 264 ntBASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CNTNAP4Q9C0A0 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 AC139713.2-201ENST00000641328 2723 ntBASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 FAM86HP-204ENST00000513466 959 ntBASIC20.19■□□□□ 0.82
CNTNAP4Q9C0A0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms