Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
YME1L1Q96TA2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 BTNL10-201ENST00000595971 695 ntBASIC17.41■□□□□ 0.38
YME1L1Q96TA2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
YME1L1Q96TA2 AC139713.2-201ENST00000641328 2723 ntBASIC17.41■□□□□ 0.38
YME1L1Q96TA2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 FO393414.2-201ENST00000405153 598 ntBASIC17.4■□□□□ 0.38
YME1L1Q96TA2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 BNIP3P42-201ENST00000454982 569 ntBASIC17.4■□□□□ 0.38
YME1L1Q96TA2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 FAM8A2P-201ENST00000528813 1142 ntBASIC17.4■□□□□ 0.38
YME1L1Q96TA2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 BNIP3P29-201ENST00000598302 571 ntBASIC17.4■□□□□ 0.38
YME1L1Q96TA2 AC011447.5-201ENST00000616168 564 ntBASIC17.4■□□□□ 0.38
YME1L1Q96TA2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
YME1L1Q96TA2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
YME1L1Q96TA2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.39■□□□□ 0.38
YME1L1Q96TA2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
YME1L1Q96TA2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.39■□□□□ 0.38
YME1L1Q96TA2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
YME1L1Q96TA2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
YME1L1Q96TA2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.39■□□□□ 0.38
YME1L1Q96TA2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 AC245100.3-201ENST00000441281 285 ntBASIC17.39■□□□□ 0.37
YME1L1Q96TA2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
YME1L1Q96TA2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms