Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AC079776.2-201ENST00000641154 1609 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AC096582.2-201ENST00000510860 516 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AP005901.3-202ENST00000581653 237 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 Z69720.1-201ENST00000601483 472 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 AL121672.3-201ENST00000608644 468 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 IER3-202ENST00000376377 1350 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AP002414.2-201ENST00000591780 3365 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB40CQ96S21 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB40CQ96S21 AL592424.1-201ENST00000563624 1536 ntBASIC13.29□□□□□ -0.28
RAB40CQ96S21 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB40CQ96S21 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB40CQ96S21 RCN1P2-201ENST00000398357 915 ntBASIC13.28□□□□□ -0.28
RAB40CQ96S21 CHCHD2P8-201ENST00000429873 447 ntBASIC13.28□□□□□ -0.28
RAB40CQ96S21 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms