Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 MIR940-201ENST00000401276 94 ntBASIC16.87■□□□□ 0.29
C9orf72Q96LT7 PTCHD3P3-201ENST00000403073 906 ntBASIC16.87■□□□□ 0.29
C9orf72Q96LT7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 AC091167.2-201ENST00000579581 588 ntBASIC16.87■□□□□ 0.29
C9orf72Q96LT7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 PI4KAP1-204ENST00000612579 1703 ntBASIC16.87■□□□□ 0.29
C9orf72Q96LT7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.87■□□□□ 0.29
C9orf72Q96LT7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 SLC25A6P2-201ENST00000497974 877 ntBASIC16.86■□□□□ 0.29
C9orf72Q96LT7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 Z83851.2-201ENST00000609564 659 ntBASIC16.86■□□□□ 0.29
C9orf72Q96LT7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 PMS2P7-201ENST00000506558 1336 ntBASIC16.86■□□□□ 0.29
C9orf72Q96LT7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 AC092850.2-201ENST00000623821 2697 ntBASIC16.86■□□□□ 0.29
C9orf72Q96LT7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 AL513477.1-201ENST00000602865 2407 ntBASIC16.86■□□□□ 0.29
C9orf72Q96LT7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
C9orf72Q96LT7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 KRT18P27-201ENST00000427733 1299 ntBASIC16.85■□□□□ 0.29
C9orf72Q96LT7 UNC93B6-202ENST00000528242 690 ntBASIC16.85■□□□□ 0.29
C9orf72Q96LT7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 AC034105.1-201ENST00000563488 319 ntBASIC16.85■□□□□ 0.29
C9orf72Q96LT7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.85■□□□□ 0.29
C9orf72Q96LT7 AL356488.2-201ENST00000602755 427 ntBASIC16.85■□□□□ 0.29
C9orf72Q96LT7 AC027601.4-201ENST00000611259 610 ntBASIC16.85■□□□□ 0.29
C9orf72Q96LT7 GPALPP1-207ENST00000611650 899 ntBASIC16.85■□□□□ 0.29
C9orf72Q96LT7 AC010654.1-201ENST00000615722 808 ntBASIC16.85■□□□□ 0.29
C9orf72Q96LT7 MIR1199-201ENST00000621445 119 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms