Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 LINC00895-201ENST00000629028 1637 ntBASIC19.05■□□□□ 0.64
TRIM47Q96LD4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 AL353705.2-201ENST00000428243 662 ntBASIC19.05■□□□□ 0.64
TRIM47Q96LD4 WASH4P-201ENST00000564273 1246 ntBASIC19.05■□□□□ 0.64
TRIM47Q96LD4 MPDU1-223ENST00000582151 728 ntBASIC19.05■□□□□ 0.64
TRIM47Q96LD4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 CHCHD2P3-201ENST00000603038 451 ntBASIC19.05■□□□□ 0.64
TRIM47Q96LD4 RN7SL828P-201ENST00000607615 303 ntBASIC19.05■□□□□ 0.64
TRIM47Q96LD4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 PCDHA14-201ENST00000506751 2298 ntBASIC19.05■□□□□ 0.64
TRIM47Q96LD4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 KRT18P34-201ENST00000488218 1270 ntBASIC19.04■□□□□ 0.64
TRIM47Q96LD4 AC011495.1-201ENST00000498085 584 ntBASIC19.04■□□□□ 0.64
TRIM47Q96LD4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 AC008494.3-201ENST00000606615 944 ntBASIC19.04■□□□□ 0.64
TRIM47Q96LD4 AC021097.1-201ENST00000607902 574 ntBASIC19.04■□□□□ 0.64
TRIM47Q96LD4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRIM47Q96LD4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 UBALD1-205ENST00000590891 2641 ntBASIC19.03■□□□□ 0.64
TRIM47Q96LD4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 RAB43P1-201ENST00000561790 589 ntBASIC19.03■□□□□ 0.64
TRIM47Q96LD4 AC106886.1-201ENST00000568660 600 ntBASIC19.03■□□□□ 0.64
TRIM47Q96LD4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 AC004790.1-201ENST00000612686 536 ntBASIC19.03■□□□□ 0.64
TRIM47Q96LD4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 AL391825.1-201ENST00000457671 1364 ntBASIC19.03■□□□□ 0.64
TRIM47Q96LD4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TRIM47Q96LD4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.02■□□□□ 0.64
TRIM47Q96LD4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms