Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AL136038.3-201ENST00000561909 1096 ntBASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AC011840.4-201ENST00000578471 627 ntBASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHMP6Q96FZ7 AC104581.4-201ENST00000623126 3052 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 KRT8P39-201ENST00000396270 1433 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 GRK6P1-201ENST00000400595 1711 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 AL031133.1-201ENST00000406807 723 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 NUS1P1-201ENST00000446295 882 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 AC090616.6-201ENST00000582640 721 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 AL590326.2-201ENST00000625139 305 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 AL121956.5-201ENST00000625261 221 ntBASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHMP6Q96FZ7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 KRT8P26-201ENST00000534154 1276 ntBASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.48■□□□□ 0.23
CHMP6Q96FZ7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms