Protein–RNA interactions for Protein: Q96C45

ULK4, Serine/threonine-protein kinase ULK4, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ULK4Q96C45 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ULK4Q96C45 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ULK4Q96C45 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.33■□□□□ 0.2
ULK4Q96C45 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ULK4Q96C45 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ULK4Q96C45 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.33■□□□□ 0.2
ULK4Q96C45 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.33■□□□□ 0.2
ULK4Q96C45 U82695.1-201ENST00000635752 1889 ntBASIC16.33■□□□□ 0.2
ULK4Q96C45 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
ULK4Q96C45 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ULK4Q96C45 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
ULK4Q96C45 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ULK4Q96C45 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ULK4Q96C45 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ULK4Q96C45 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
ULK4Q96C45 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.32■□□□□ 0.2
ULK4Q96C45 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.32■□□□□ 0.2
ULK4Q96C45 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.32■□□□□ 0.2
ULK4Q96C45 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 AC112482.1-201ENST00000492080 688 ntBASIC16.32■□□□□ 0.2
ULK4Q96C45 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.32■□□□□ 0.2
ULK4Q96C45 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.32■□□□□ 0.2
ULK4Q96C45 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.32■□□□□ 0.2
ULK4Q96C45 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.32■□□□□ 0.2
ULK4Q96C45 AC073439.1-201ENST00000624121 1774 ntBASIC16.32■□□□□ 0.2
ULK4Q96C45 AC008267.7-201ENST00000624570 1194 ntBASIC16.32■□□□□ 0.2
ULK4Q96C45 AC018695.7-201ENST00000624587 2492 ntBASIC16.32■□□□□ 0.2
ULK4Q96C45 AC005622.1-201ENST00000636801 1703 ntBASIC16.32■□□□□ 0.2
ULK4Q96C45 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.32■□□□□ 0.2
ULK4Q96C45 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ULK4Q96C45 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 AC006449.5-201ENST00000610658 2098 ntBASIC16.31■□□□□ 0.2
ULK4Q96C45 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
ULK4Q96C45 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ULK4Q96C45 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.31■□□□□ 0.2
ULK4Q96C45 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.31■□□□□ 0.2
ULK4Q96C45 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
ULK4Q96C45 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.31■□□□□ 0.2
ULK4Q96C45 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.31■□□□□ 0.2
ULK4Q96C45 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.31■□□□□ 0.2
ULK4Q96C45 KRT18P13-201ENST00000400056 1290 ntBASIC16.31■□□□□ 0.2
ULK4Q96C45 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.31■□□□□ 0.2
ULK4Q96C45 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.31■□□□□ 0.2
ULK4Q96C45 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.31■□□□□ 0.2
ULK4Q96C45 TIMM8BP1-201ENST00000452384 211 ntBASIC16.31■□□□□ 0.2
ULK4Q96C45 AC105233.2-201ENST00000523697 349 ntBASIC16.31■□□□□ 0.2
ULK4Q96C45 AF228730.5-201ENST00000530288 346 ntBASIC16.31■□□□□ 0.2
ULK4Q96C45 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.31■□□□□ 0.2
ULK4Q96C45 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.31■□□□□ 0.2
ULK4Q96C45 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.31■□□□□ 0.2
ULK4Q96C45 MIR4469-201ENST00000583919 79 ntBASIC16.31■□□□□ 0.2
ULK4Q96C45 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.31■□□□□ 0.2
ULK4Q96C45 AC073389.1-201ENST00000595595 795 ntBASIC16.31■□□□□ 0.2
ULK4Q96C45 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ULK4Q96C45 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms