Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 CICP4-201ENST00000447359 2812 ntBASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.99□□□□□ -0.17
SMIM4Q8WVI0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 AC091951.1-201ENST00000512854 2465 ntBASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 LIN28AP1-201ENST00000429574 405 ntBASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 HOMER2P1-201ENST00000455653 964 ntBASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 CYP2A7P1-201ENST00000595391 815 ntBASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 IGHV3-41-201ENST00000613121 348 ntBASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 AP000867.4-201ENST00000641616 219 ntBASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 TP73-AS1-210ENST00000637775 1455 ntBASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM4Q8WVI0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC104581.4-201ENST00000623126 3052 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 LINC00552-201ENST00000625151 2579 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC105250.1-201ENST00000509378 2057 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 SPDYE13P-201ENST00000445314 798 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 ATP5G1P1-201ENST00000448724 379 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 VENTXP7-201ENST00000475503 772 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC139887.4-201ENST00000607877 719 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 AC005622.1-201ENST00000636801 1703 ntBASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM4Q8WVI0 INTS4P1-201ENST00000438455 1935 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms