Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC10.76□□□□□ -0.69
ALMS1Q8TCU4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 FO393414.2-201ENST00000405153 598 ntBASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 FTLP1-201ENST00000449155 526 ntBASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC008267.1-201ENST00000474858 1069 ntBASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC004987.2-201ENST00000395959 1148 ntBASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC145423.3-201ENST00000615987 467 ntBASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
ALMS1Q8TCU4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 USP40-206ENST00000443711 628 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC023310.1-201ENST00000554836 735 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 U82695.1-201ENST00000635752 1889 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC245100.5-201ENST00000452108 331 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 GAPDHP40-201ENST00000505218 1006 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC079336.7-201ENST00000623428 1078 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 FTLP10-202ENST00000505798 471 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 RN7SL555P-201ENST00000584742 339 ntBASIC10.74□□□□□ -0.69
ALMS1Q8TCU4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms