Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
NKX2-3Q8TAU0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 POU5F1P6-201ENST00000466990 990 ntBASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 AL606495.2-201ENST00000605867 535 ntBASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 AC017083.2-201ENST00000608069 979 ntBASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 AC006449.6-201ENST00000612330 2296 ntBASIC19.2■□□□□ 0.66
NKX2-3Q8TAU0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 AL133215.2-201ENST00000609242 977 ntBASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 AC018529.1-201ENST00000613063 361 ntBASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 AL136982.4-201ENST00000437689 1740 ntBASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NKX2-3Q8TAU0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 RNA5SP410-201ENST00000516285 106 ntBASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AC027369.6-201ENST00000525520 931 ntBASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AL590560.3-201ENST00000623350 461 ntBASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AC073592.8-201ENST00000624126 511 ntBASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 AC022144.1-201ENST00000602255 1580 ntBASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.18■□□□□ 0.66
NKX2-3Q8TAU0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 AC018695.7-201ENST00000624587 2492 ntBASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NKX2-3Q8TAU0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms