Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SOCS2P1-201ENST00000417727 557 ntBASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 MTX1P1-201ENST00000440904 838 ntBASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AP006547.1-201ENST00000563435 692 ntBASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 AC133539.2-201ENST00000604757 467 ntBASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 NKAIN1P1-201ENST00000435754 582 ntBASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AL139010.1-201ENST00000454878 894 ntBASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AL158212.4-201ENST00000624062 1286 ntBASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AP001063.1-201ENST00000568332 529 ntBASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCDC168Q8NDH2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CCDC168Q8NDH2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms