Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC002056.1-201ENST00000395613 760 ntBASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 UPF3AP3-201ENST00000420996 769 ntBASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 FAM58CP-201ENST00000435741 640 ntBASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 DNAJB3-201ENST00000446806 729 ntBASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 ALG1L5P-201ENST00000482043 771 ntBASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 YBX1P5-201ENST00000509441 847 ntBASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 GGT4P-201ENST00000623672 1708 ntBASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
C11orf42Q8N5U0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 HTR5BP-201ENST00000430851 1154 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AC112191.1-201ENST00000523689 701 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AC092865.5-201ENST00000545435 363 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AC005829.1-201ENST00000570002 483 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AC010327.4-202ENST00000591484 748 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AC021097.1-201ENST00000607902 574 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 DOC2GP-204ENST00000639052 2548 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
C11orf42Q8N5U0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.64□□□□□ -0.23
C11orf42Q8N5U0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms