Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 AC112191.1-201ENST00000523689 701 ntBASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 AC092919.2-201ENST00000623631 1645 ntBASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TTC9CQ8N5M4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AP002472.1-201ENST00000577490 586 ntBASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AL513190.1-201ENST00000621254 727 ntBASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 WASH6P-202ENST00000359512 1437 ntBASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TTC9CQ8N5M4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 PCDH8P1-201ENST00000428983 2773 ntBASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TTC9CQ8N5M4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms