Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AL390754.1-201ENST00000619088 582 ntBASIC19.35■□□□□ 0.69
CTR9Q6PD62 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 IGHV3-42-201ENST00000520410 361 ntBASIC19.34■□□□□ 0.69
CTR9Q6PD62 AC027369.6-201ENST00000525520 931 ntBASIC19.34■□□□□ 0.69
CTR9Q6PD62 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 AC073592.8-201ENST00000624126 511 ntBASIC19.34■□□□□ 0.69
CTR9Q6PD62 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTR9Q6PD62 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CTR9Q6PD62 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTR9Q6PD62 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.33■□□□□ 0.69
CTR9Q6PD62 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTR9Q6PD62 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 BASP1P1-201ENST00000430708 665 ntBASIC19.33■□□□□ 0.68
CTR9Q6PD62 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AL590560.3-201ENST00000623350 461 ntBASIC19.33■□□□□ 0.68
CTR9Q6PD62 AL592424.1-201ENST00000563624 1536 ntBASIC19.33■□□□□ 0.68
CTR9Q6PD62 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.33■□□□□ 0.68
CTR9Q6PD62 REXO1L8P-201ENST00000604378 1897 ntBASIC19.33■□□□□ 0.68
CTR9Q6PD62 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTR9Q6PD62 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTR9Q6PD62 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTR9Q6PD62 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.32■□□□□ 0.68
CTR9Q6PD62 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTR9Q6PD62 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTR9Q6PD62 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTR9Q6PD62 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTR9Q6PD62 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTR9Q6PD62 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.32■□□□□ 0.68
CTR9Q6PD62 RPL37AP1-201ENST00000412502 279 ntBASIC19.32■□□□□ 0.68
CTR9Q6PD62 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.32■□□□□ 0.68
CTR9Q6PD62 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.32■□□□□ 0.68
CTR9Q6PD62 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.32■□□□□ 0.68
CTR9Q6PD62 MTND6P24-201ENST00000440466 518 ntBASIC19.32■□□□□ 0.68
CTR9Q6PD62 HLA-V-204ENST00000476601 1289 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms