Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RPS4XP62701 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.75□□□□□ -0.05
RPS4XP62701 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RPS4XP62701 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.75□□□□□ -0.05
RPS4XP62701 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.75□□□□□ -0.05
RPS4XP62701 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 AC132872.4-202ENST00000622924 2756 ntBASIC14.74□□□□□ -0.05
RPS4XP62701 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RPS4XP62701 AP005117.1-202ENST00000581724 1908 ntBASIC14.74□□□□□ -0.05
RPS4XP62701 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 AC008677.1-201ENST00000519230 1561 ntBASIC14.74□□□□□ -0.05
RPS4XP62701 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS4XP62701 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.74□□□□□ -0.05
RPS4XP62701 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 AC092474.2-201ENST00000424288 719 ntBASIC14.74□□□□□ -0.05
RPS4XP62701 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.74□□□□□ -0.05
RPS4XP62701 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.74□□□□□ -0.05
RPS4XP62701 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS4XP62701 KRT19P2-202ENST00000557173 1012 ntBASIC14.74□□□□□ -0.05
RPS4XP62701 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.74□□□□□ -0.05
RPS4XP62701 AC023141.13-201ENST00000604991 943 ntBASIC14.74□□□□□ -0.05
RPS4XP62701 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS4XP62701 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 PAUPAR-201ENST00000630360 2965 ntBASIC14.74□□□□□ -0.05
RPS4XP62701 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.74□□□□□ -0.05
RPS4XP62701 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS4XP62701 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.74□□□□□ -0.05
RPS4XP62701 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RPS4XP62701 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RPS4XP62701 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RPS4XP62701 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS4XP62701 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 AL139384.1-201ENST00000612143 3047 ntBASIC14.73□□□□□ -0.05
RPS4XP62701 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS4XP62701 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS4XP62701 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 ACTG1P14-201ENST00000446382 1122 ntBASIC14.73□□□□□ -0.05
RPS4XP62701 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RPS4XP62701 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.73□□□□□ -0.05
RPS4XP62701 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.73□□□□□ -0.05
RPS4XP62701 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RPS4XP62701 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.73□□□□□ -0.05
RPS4XP62701 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RPS4XP62701 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RPS4XP62701 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RPS4XP62701 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RPS4XP62701 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
RPS4XP62701 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RPS4XP62701 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms