Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
VSX2P58304 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.64■□□□□ 0.09
VSX2P58304 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.64■□□□□ 0.09
VSX2P58304 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.64■□□□□ 0.09
VSX2P58304 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 AC098859.1-201ENST00000502915 1238 ntBASIC15.64■□□□□ 0.09
VSX2P58304 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 MIR6080-201ENST00000617359 66 ntBASIC15.64■□□□□ 0.09
VSX2P58304 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.64■□□□□ 0.09
VSX2P58304 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VSX2P58304 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.64■□□□□ 0.09
VSX2P58304 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.63■□□□□ 0.09
VSX2P58304 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
VSX2P58304 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.63■□□□□ 0.09
VSX2P58304 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 PCDHA14-201ENST00000506751 2298 ntBASIC15.63■□□□□ 0.09
VSX2P58304 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
VSX2P58304 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 HLA-H-201ENST00000383620 1096 ntBASIC15.63■□□□□ 0.09
VSX2P58304 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.63■□□□□ 0.09
VSX2P58304 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.63■□□□□ 0.09
VSX2P58304 FAM86GP-201ENST00000448322 971 ntBASIC15.63■□□□□ 0.09
VSX2P58304 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.63■□□□□ 0.09
VSX2P58304 RNA5SP410-201ENST00000516285 106 ntBASIC15.63■□□□□ 0.09
VSX2P58304 RFPL4AP1-201ENST00000530883 850 ntBASIC15.63■□□□□ 0.09
VSX2P58304 AC069262.1-201ENST00000539058 672 ntBASIC15.63■□□□□ 0.09
VSX2P58304 AL512356.2-201ENST00000546955 174 ntBASIC15.63■□□□□ 0.09
VSX2P58304 RARRES2P9-201ENST00000565168 469 ntBASIC15.63■□□□□ 0.09
VSX2P58304 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.63■□□□□ 0.09
VSX2P58304 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VSX2P58304 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.63■□□□□ 0.09
VSX2P58304 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.63■□□□□ 0.09
VSX2P58304 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VSX2P58304 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.63■□□□□ 0.09
VSX2P58304 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 AC008677.1-201ENST00000519230 1561 ntBASIC15.62■□□□□ 0.09
VSX2P58304 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
VSX2P58304 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VSX2P58304 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms