Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
WNT3AP56704 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 MIR648-201ENST00000385046 94 ntBASIC16.49■□□□□ 0.23
WNT3AP56704 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.49■□□□□ 0.23
WNT3AP56704 CEND1P1-201ENST00000451006 455 ntBASIC16.49■□□□□ 0.23
WNT3AP56704 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT3AP56704 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT3AP56704 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT3AP56704 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT3AP56704 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT3AP56704 LINC01225-203ENST00000563550 1244 ntBASIC16.49■□□□□ 0.23
WNT3AP56704 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.49■□□□□ 0.23
WNT3AP56704 AC010327.4-202ENST00000591484 748 ntBASIC16.49■□□□□ 0.23
WNT3AP56704 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.49■□□□□ 0.23
WNT3AP56704 AL365330.1-201ENST00000607459 531 ntBASIC16.49■□□□□ 0.23
WNT3AP56704 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT3AP56704 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT3AP56704 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.49■□□□□ 0.23
WNT3AP56704 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
WNT3AP56704 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.49■□□□□ 0.23
WNT3AP56704 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
WNT3AP56704 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 GPX1P2-201ENST00000429271 606 ntBASIC16.48■□□□□ 0.23
WNT3AP56704 AC112482.1-201ENST00000492080 688 ntBASIC16.48■□□□□ 0.23
WNT3AP56704 AC098859.1-201ENST00000502915 1238 ntBASIC16.48■□□□□ 0.23
WNT3AP56704 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.48■□□□□ 0.23
WNT3AP56704 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
WNT3AP56704 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.48■□□□□ 0.23
WNT3AP56704 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.48■□□□□ 0.23
WNT3AP56704 MIR4469-201ENST00000583919 79 ntBASIC16.48■□□□□ 0.23
WNT3AP56704 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.48■□□□□ 0.23
WNT3AP56704 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.48■□□□□ 0.23
WNT3AP56704 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
WNT3AP56704 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.48■□□□□ 0.23
WNT3AP56704 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 SPTSSB-204ENST00000617024 1292 ntBASIC16.48■□□□□ 0.23
WNT3AP56704 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.48■□□□□ 0.23
WNT3AP56704 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.48■□□□□ 0.23
WNT3AP56704 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
WNT3AP56704 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.48■□□□□ 0.23
WNT3AP56704 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
WNT3AP56704 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
WNT3AP56704 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
WNT3AP56704 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.47■□□□□ 0.23
WNT3AP56704 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 AC142381.1-201ENST00000426099 345 ntBASIC16.47■□□□□ 0.23
WNT3AP56704 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.47■□□□□ 0.23
WNT3AP56704 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.47■□□□□ 0.23
WNT3AP56704 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.47■□□□□ 0.23
WNT3AP56704 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.47■□□□□ 0.23
WNT3AP56704 YBX1P5-201ENST00000509441 847 ntBASIC16.47■□□□□ 0.23
WNT3AP56704 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
WNT3AP56704 MIR3687-2-201ENST00000577708 61 ntBASIC16.47■□□□□ 0.23
WNT3AP56704 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.47■□□□□ 0.23
WNT3AP56704 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.47■□□□□ 0.23
WNT3AP56704 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms