Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.03■□□□□ -0
CDH11P55287 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.03■□□□□ -0
CDH11P55287 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDH11P55287 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.03■□□□□ -0
CDH11P55287 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.03■□□□□ -0
CDH11P55287 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.03■□□□□ -0
CDH11P55287 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 AL590787.1-201ENST00000568856 1315 ntBASIC15.03■□□□□ -0
CDH11P55287 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.03■□□□□ -0
CDH11P55287 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.03■□□□□ -0
CDH11P55287 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.03■□□□□ -0
CDH11P55287 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.03■□□□□ -0
CDH11P55287 AC007967.2-201ENST00000432613 625 ntBASIC15.03■□□□□ -0
CDH11P55287 AC009947.1-201ENST00000444350 727 ntBASIC15.03■□□□□ -0
CDH11P55287 KRT18P3-201ENST00000451602 1288 ntBASIC15.03■□□□□ -0
CDH11P55287 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.03■□□□□ -0
CDH11P55287 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CDH11P55287 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
CDH11P55287 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 SNX33P1-201ENST00000592116 1762 ntBASIC15.03■□□□□ -0
CDH11P55287 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.03■□□□□ -0
CDH11P55287 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.03■□□□□ -0
CDH11P55287 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.02■□□□□ -0
CDH11P55287 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDH11P55287 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.02■□□□□ -0
CDH11P55287 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.02■□□□□ -0
CDH11P55287 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CDH11P55287 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.02■□□□□ -0
CDH11P55287 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDH11P55287 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.02■□□□□ -0
CDH11P55287 TOP3BP1-201ENST00000420768 1380 ntBASIC15.02■□□□□ -0
CDH11P55287 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDH11P55287 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.02■□□□□ -0
CDH11P55287 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 AC073621.1-201ENST00000392730 636 ntBASIC15.02■□□□□ -0
CDH11P55287 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
CDH11P55287 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDH11P55287 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.02■□□□□ -0
CDH11P55287 AC004706.3-202ENST00000621574 984 ntBASIC15.02■□□□□ -0
CDH11P55287 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH11P55287 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH11P55287 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH11P55287 AL512652.2-201ENST00000625156 1716 ntBASIC15.02□□□□□ -0.01
CDH11P55287 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CDH11P55287 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH11P55287 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 AL031731.1-201ENST00000642131 2094 ntBASIC15.02□□□□□ -0.01
CDH11P55287 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH11P55287 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDH11P55287 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.02□□□□□ -0.01
CDH11P55287 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.02□□□□□ -0.01
CDH11P55287 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDH11P55287 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.02□□□□□ -0.01
CDH11P55287 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDH11P55287 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH11P55287 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH11P55287 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH11P55287 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms