Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.27■□□□□ 0.84
AFDNP55196 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.27■□□□□ 0.84
AFDNP55196 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.27■□□□□ 0.84
AFDNP55196 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.27■□□□□ 0.84
AFDNP55196 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
AFDNP55196 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.27■□□□□ 0.84
AFDNP55196 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.27■□□□□ 0.84
AFDNP55196 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.27■□□□□ 0.84
AFDNP55196 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.27■□□□□ 0.84
AFDNP55196 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.27■□□□□ 0.84
AFDNP55196 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.27■□□□□ 0.84
AFDNP55196 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
AFDNP55196 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AFDNP55196 AC099336.1-201ENST00000417053 1171 ntBASIC20.27■□□□□ 0.84
AFDNP55196 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.27■□□□□ 0.84
AFDNP55196 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.27■□□□□ 0.84
AFDNP55196 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.27■□□□□ 0.84
AFDNP55196 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.27■□□□□ 0.84
AFDNP55196 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
AFDNP55196 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.27■□□□□ 0.84
AFDNP55196 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.27■□□□□ 0.84
AFDNP55196 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
AFDNP55196 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
AFDNP55196 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
AFDNP55196 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
AFDNP55196 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 AL162726.2-201ENST00000438986 1017 ntBASIC20.26■□□□□ 0.83
AFDNP55196 CSF2RBP1-201ENST00000447905 391 ntBASIC20.26■□□□□ 0.83
AFDNP55196 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
AFDNP55196 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
AFDNP55196 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.26■□□□□ 0.83
AFDNP55196 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
AFDNP55196 AL133338.1-201ENST00000565695 1517 ntBASIC20.26■□□□□ 0.83
AFDNP55196 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AFDNP55196 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.26■□□□□ 0.83
AFDNP55196 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.25■□□□□ 0.83
AFDNP55196 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.25■□□□□ 0.83
AFDNP55196 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 CTBP2P5-201ENST00000454986 1264 ntBASIC20.25■□□□□ 0.83
AFDNP55196 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.25■□□□□ 0.83
AFDNP55196 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.25■□□□□ 0.83
AFDNP55196 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.25■□□□□ 0.83
AFDNP55196 MIR6787-201ENST00000616675 61 ntBASIC20.25■□□□□ 0.83
AFDNP55196 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
AFDNP55196 KRT8P44-201ENST00000441609 1350 ntBASIC20.25■□□□□ 0.83
AFDNP55196 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
AFDNP55196 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.25■□□□□ 0.83
AFDNP55196 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
AFDNP55196 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.25■□□□□ 0.83
AFDNP55196 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.25■□□□□ 0.83
AFDNP55196 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.25■□□□□ 0.83
AFDNP55196 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.25■□□□□ 0.83
AFDNP55196 AC233724.13-201ENST00000598383 410 ntBASIC20.25■□□□□ 0.83
AFDNP55196 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.25■□□□□ 0.83
AFDNP55196 GPR182-203ENST00000622922 591 ntBASIC20.25■□□□□ 0.83
AFDNP55196 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
AFDNP55196 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AFDNP55196 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
AFDNP55196 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.24■□□□□ 0.83
AFDNP55196 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AFDNP55196 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AFDNP55196 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms