Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGCS2P54868 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGCS2P54868 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGCS2P54868 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMGCS2P54868 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCS2P54868 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 LETM1P2-201ENST00000597330 2178 ntBASIC18.67■□□□□ 0.58
HMGCS2P54868 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS2P54868 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS2P54868 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCS2P54868 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS2P54868 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCS2P54868 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGCS2P54868 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 AC010319.3-201ENST00000597028 470 ntBASIC18.67■□□□□ 0.58
HMGCS2P54868 MIR6775-201ENST00000617557 69 ntBASIC18.67■□□□□ 0.58
HMGCS2P54868 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 RPSAP52-203ENST00000622976 1023 ntBASIC18.67■□□□□ 0.58
HMGCS2P54868 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 AC078925.2-201ENST00000624013 1973 ntBASIC18.67■□□□□ 0.58
HMGCS2P54868 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS2P54868 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS2P54868 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGCS2P54868 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
HMGCS2P54868 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGCS2P54868 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS2P54868 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS2P54868 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.66■□□□□ 0.58
HMGCS2P54868 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
HMGCS2P54868 AZGP1P1-201ENST00000411909 902 ntBASIC18.66■□□□□ 0.58
HMGCS2P54868 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS2P54868 RN7SL399P-201ENST00000471648 279 ntBASIC18.66■□□□□ 0.58
HMGCS2P54868 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS2P54868 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HMGCS2P54868 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 COX11-210ENST00000639671 696 ntBASIC18.66■□□□□ 0.58
HMGCS2P54868 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGCS2P54868 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS2P54868 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGCS2P54868 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HMGCS2P54868 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGCS2P54868 AL691432.1-201ENST00000596308 1422 ntBASIC18.66■□□□□ 0.58
HMGCS2P54868 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMGCS2P54868 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCS2P54868 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCS2P54868 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCS2P54868 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCS2P54868 KRT223P-202ENST00000449164 1292 ntBASIC18.65■□□□□ 0.58
HMGCS2P54868 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCS2P54868 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCS2P54868 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCS2P54868 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCS2P54868 AC015936.2-201ENST00000593177 259 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms