Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.94■□□□□ 0.46
PMS1P54277 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.94■□□□□ 0.46
PMS1P54277 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.94■□□□□ 0.46
PMS1P54277 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
PMS1P54277 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.94■□□□□ 0.46
PMS1P54277 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PMS1P54277 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.94■□□□□ 0.46
PMS1P54277 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
PMS1P54277 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.94■□□□□ 0.46
PMS1P54277 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.94■□□□□ 0.46
PMS1P54277 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PMS1P54277 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.94■□□□□ 0.46
PMS1P54277 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.94■□□□□ 0.46
PMS1P54277 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 WASH6P-202ENST00000359512 1437 ntBASIC17.94■□□□□ 0.46
PMS1P54277 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
PMS1P54277 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
PMS1P54277 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.94■□□□□ 0.46
PMS1P54277 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.94■□□□□ 0.46
PMS1P54277 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.94■□□□□ 0.46
PMS1P54277 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PMS1P54277 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PMS1P54277 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.93■□□□□ 0.46
PMS1P54277 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
PMS1P54277 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 ZNF259P1-201ENST00000407656 1365 ntBASIC17.93■□□□□ 0.46
PMS1P54277 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.93■□□□□ 0.46
PMS1P54277 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.93■□□□□ 0.46
PMS1P54277 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
PMS1P54277 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.93■□□□□ 0.46
PMS1P54277 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.93■□□□□ 0.46
PMS1P54277 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.93■□□□□ 0.46
PMS1P54277 AC002347.1-201ENST00000569543 541 ntBASIC17.93■□□□□ 0.46
PMS1P54277 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PMS1P54277 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.93■□□□□ 0.46
PMS1P54277 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.93■□□□□ 0.46
PMS1P54277 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PMS1P54277 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.93■□□□□ 0.46
PMS1P54277 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PMS1P54277 FOXO1B-201ENST00000504678 1527 ntBASIC17.93■□□□□ 0.46
PMS1P54277 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.92■□□□□ 0.46
PMS1P54277 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PMS1P54277 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.92■□□□□ 0.46
PMS1P54277 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 KRT18P3-201ENST00000451602 1288 ntBASIC17.92■□□□□ 0.46
PMS1P54277 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.92■□□□□ 0.46
PMS1P54277 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PMS1P54277 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.92■□□□□ 0.46
PMS1P54277 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.92■□□□□ 0.46
PMS1P54277 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms