Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.29■□□□□ 0.52
TM4SF4P48230 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.29■□□□□ 0.52
TM4SF4P48230 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AC097724.1-201ENST00000609581 426 ntBASIC18.29■□□□□ 0.52
TM4SF4P48230 AL096828.3-201ENST00000615354 462 ntBASIC18.29■□□□□ 0.52
TM4SF4P48230 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
TM4SF4P48230 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF4P48230 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF4P48230 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.28■□□□□ 0.52
TM4SF4P48230 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.28■□□□□ 0.52
TM4SF4P48230 AC008764.6-201ENST00000595909 2069 ntBASIC18.28■□□□□ 0.52
TM4SF4P48230 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.28■□□□□ 0.52
TM4SF4P48230 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.28■□□□□ 0.52
TM4SF4P48230 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.28■□□□□ 0.52
TM4SF4P48230 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.28■□□□□ 0.52
TM4SF4P48230 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.28■□□□□ 0.52
TM4SF4P48230 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.28■□□□□ 0.52
TM4SF4P48230 IMP3P2-201ENST00000489760 475 ntBASIC18.28■□□□□ 0.52
TM4SF4P48230 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.28■□□□□ 0.52
TM4SF4P48230 NDUFV2P1-201ENST00000596415 907 ntBASIC18.28■□□□□ 0.52
TM4SF4P48230 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.28■□□□□ 0.52
TM4SF4P48230 DRD5P1-201ENST00000456605 1438 ntBASIC18.28■□□□□ 0.52
TM4SF4P48230 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.28■□□□□ 0.52
TM4SF4P48230 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.28■□□□□ 0.52
TM4SF4P48230 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 AC018735.1-201ENST00000437208 1502 ntBASIC18.28■□□□□ 0.52
TM4SF4P48230 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM4SF4P48230 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
TM4SF4P48230 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF4P48230 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF4P48230 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 CD8B2-202ENST00000417670 633 ntBASIC18.27■□□□□ 0.52
TM4SF4P48230 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF4P48230 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.27■□□□□ 0.52
TM4SF4P48230 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.27■□□□□ 0.52
TM4SF4P48230 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF4P48230 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF4P48230 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.27■□□□□ 0.52
TM4SF4P48230 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.27■□□□□ 0.52
TM4SF4P48230 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.27■□□□□ 0.52
TM4SF4P48230 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.27■□□□□ 0.52
TM4SF4P48230 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.27■□□□□ 0.52
TM4SF4P48230 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 AL138709.1-201ENST00000614840 1693 ntBASIC18.27■□□□□ 0.52
TM4SF4P48230 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TM4SF4P48230 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF4P48230 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF4P48230 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF4P48230 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.27■□□□□ 0.51
TM4SF4P48230 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF4P48230 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.27■□□□□ 0.51
TM4SF4P48230 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.27■□□□□ 0.51
TM4SF4P48230 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.27■□□□□ 0.51
TM4SF4P48230 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF4P48230 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.27■□□□□ 0.51
TM4SF4P48230 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF4P48230 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TM4SF4P48230 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
TM4SF4P48230 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF4P48230 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
TM4SF4P48230 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF4P48230 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF4P48230 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.26■□□□□ 0.51
TM4SF4P48230 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
TM4SF4P48230 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TM4SF4P48230 AC091046.1-201ENST00000331871 207 ntBASIC18.26■□□□□ 0.51
TM4SF4P48230 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TM4SF4P48230 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
TM4SF4P48230 MIR1202-201ENST00000408529 83 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms