Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD4P46934 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NEDD4P46934 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD4P46934 AL645939.2-201ENST00000427340 991 ntBASIC19.15■□□□□ 0.66
NEDD4P46934 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.15■□□□□ 0.66
NEDD4P46934 AC125807.1-201ENST00000483097 614 ntBASIC19.15■□□□□ 0.66
NEDD4P46934 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.15■□□□□ 0.66
NEDD4P46934 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD4P46934 AC105021.1-202ENST00000570572 669 ntBASIC19.15■□□□□ 0.66
NEDD4P46934 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.15■□□□□ 0.66
NEDD4P46934 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.15■□□□□ 0.66
NEDD4P46934 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
NEDD4P46934 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NEDD4P46934 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
NEDD4P46934 PCDHA1-201ENST00000378133 2726 ntBASIC19.14■□□□□ 0.66
NEDD4P46934 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
NEDD4P46934 AL139384.1-201ENST00000612143 3047 ntBASIC19.14■□□□□ 0.66
NEDD4P46934 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NEDD4P46934 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 AL136982.4-201ENST00000437689 1740 ntBASIC19.14■□□□□ 0.65
NEDD4P46934 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.14■□□□□ 0.65
NEDD4P46934 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
NEDD4P46934 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
NEDD4P46934 AL353705.2-201ENST00000428243 662 ntBASIC19.14■□□□□ 0.65
NEDD4P46934 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.14■□□□□ 0.65
NEDD4P46934 FAM86GP-201ENST00000448322 971 ntBASIC19.14■□□□□ 0.65
NEDD4P46934 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.14■□□□□ 0.65
NEDD4P46934 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.14■□□□□ 0.65
NEDD4P46934 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.14■□□□□ 0.65
NEDD4P46934 AC027796.2-201ENST00000575326 344 ntBASIC19.14■□□□□ 0.65
NEDD4P46934 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.14■□□□□ 0.65
NEDD4P46934 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NEDD4P46934 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NEDD4P46934 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.13■□□□□ 0.65
NEDD4P46934 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 KLF2P3-201ENST00000451977 1087 ntBASIC19.13■□□□□ 0.65
NEDD4P46934 AC245100.5-201ENST00000452108 331 ntBASIC19.13■□□□□ 0.65
NEDD4P46934 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.13■□□□□ 0.65
NEDD4P46934 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.13■□□□□ 0.65
NEDD4P46934 AL133215.2-201ENST00000609242 977 ntBASIC19.13■□□□□ 0.65
NEDD4P46934 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 AC093512.1-201ENST00000617969 520 ntBASIC19.13■□□□□ 0.65
NEDD4P46934 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.13■□□□□ 0.65
NEDD4P46934 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NEDD4P46934 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.13■□□□□ 0.65
NEDD4P46934 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
NEDD4P46934 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NEDD4P46934 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.12■□□□□ 0.65
NEDD4P46934 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NEDD4P46934 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
NEDD4P46934 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.12■□□□□ 0.65
NEDD4P46934 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEDD4P46934 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NEDD4P46934 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms