Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.77□□□□□ -0.05
APOBEC1P41238 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.77□□□□□ -0.05
APOBEC1P41238 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
APOBEC1P41238 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 FER1L4-210ENST00000615531 5998 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 AC211486.1-202ENST00000416371 468 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.76□□□□□ -0.05
APOBEC1P41238 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.76□□□□□ -0.05
APOBEC1P41238 AC211476.1-201ENST00000503899 468 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 AP000344.2-201ENST00000512987 629 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 MIR4321-201ENST00000592276 80 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 AC022145.2-201ENST00000598203 171 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 AC084121.4-201ENST00000641598 221 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 AF228730.8-201ENST00000642140 221 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 AC026691.1-201ENST00000602502 2017 ntBASIC14.76□□□□□ -0.05
APOBEC1P41238 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOBEC1P41238 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
APOBEC1P41238 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
APOBEC1P41238 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.76□□□□□ -0.05
APOBEC1P41238 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
APOBEC1P41238 AL391005.1-201ENST00000623953 2435 ntBASIC14.75□□□□□ -0.05
APOBEC1P41238 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBEC1P41238 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.75□□□□□ -0.05
APOBEC1P41238 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBEC1P41238 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.75□□□□□ -0.05
APOBEC1P41238 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBEC1P41238 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBEC1P41238 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBEC1P41238 KRT18P13-201ENST00000400056 1290 ntBASIC14.75□□□□□ -0.05
APOBEC1P41238 AC142381.1-201ENST00000426099 345 ntBASIC14.75□□□□□ -0.05
APOBEC1P41238 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOBEC1P41238 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.75□□□□□ -0.05
APOBEC1P41238 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.75□□□□□ -0.05
APOBEC1P41238 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
APOBEC1P41238 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.75□□□□□ -0.05
APOBEC1P41238 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.75□□□□□ -0.05
APOBEC1P41238 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.75□□□□□ -0.05
APOBEC1P41238 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.75□□□□□ -0.05
APOBEC1P41238 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.75□□□□□ -0.05
APOBEC1P41238 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms