Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXC13P31276 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXC13P31276 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXC13P31276 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 ARSEP1-201ENST00000420443 635 ntBASIC16.82■□□□□ 0.28
HOXC13P31276 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC13P31276 AC010336.2-201ENST00000564226 506 ntBASIC16.82■□□□□ 0.28
HOXC13P31276 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC13P31276 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC13P31276 AL365330.1-201ENST00000607459 531 ntBASIC16.82■□□□□ 0.28
HOXC13P31276 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC13P31276 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC13P31276 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC13P31276 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC13P31276 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC13P31276 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 OR6D1P-202ENST00000641007 5290 ntBASIC16.82■□□□□ 0.28
HOXC13P31276 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOXC13P31276 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC13P31276 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC13P31276 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
HOXC13P31276 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC13P31276 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXC13P31276 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXC13P31276 GNAQP1-201ENST00000444815 1067 ntBASIC16.81■□□□□ 0.28
HOXC13P31276 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 HILS1-202ENST00000545329 423 ntBASIC16.81■□□□□ 0.28
HOXC13P31276 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXC13P31276 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.81■□□□□ 0.28
HOXC13P31276 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HOXC13P31276 AC004840.1-201ENST00000636359 365 ntBASIC16.81■□□□□ 0.28
HOXC13P31276 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HOXC13P31276 AC138932.1-201ENST00000534164 6830 ntBASIC16.81■□□□□ 0.28
HOXC13P31276 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 AL662844.4-201ENST00000606367 2838 ntBASIC16.81■□□□□ 0.28
HOXC13P31276 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HOXC13P31276 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HOXC13P31276 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXC13P31276 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXC13P31276 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXC13P31276 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
HOXC13P31276 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC13P31276 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC13P31276 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC13P31276 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC13P31276 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HOXC13P31276 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HOXC13P31276 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 AC245100.5-201ENST00000452108 331 ntBASIC16.8■□□□□ 0.28
HOXC13P31276 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC13P31276 AC061975.2-201ENST00000581722 295 ntBASIC16.8■□□□□ 0.28
HOXC13P31276 AL359881.2-201ENST00000602973 570 ntBASIC16.8■□□□□ 0.28
HOXC13P31276 AC009118.2-201ENST00000613275 655 ntBASIC16.8■□□□□ 0.28
HOXC13P31276 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HOXC13P31276 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC13P31276 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms