Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.3■□□□□ 0.04
CCL4P13236 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.3■□□□□ 0.04
CCL4P13236 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.3■□□□□ 0.04
CCL4P13236 AC078925.2-201ENST00000624013 1973 ntBASIC15.3■□□□□ 0.04
CCL4P13236 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCL4P13236 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCL4P13236 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CCL4P13236 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 HLA-A-202ENST00000376806 1854 ntBASIC15.29■□□□□ 0.04
CCL4P13236 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 CDC14C-201ENST00000428251 1719 ntBASIC15.29■□□□□ 0.04
CCL4P13236 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.29■□□□□ 0.04
CCL4P13236 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
CCL4P13236 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.29■□□□□ 0.04
CCL4P13236 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.29■□□□□ 0.04
CCL4P13236 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.29■□□□□ 0.04
CCL4P13236 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.29■□□□□ 0.04
CCL4P13236 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 AC106886.1-201ENST00000568660 600 ntBASIC15.29■□□□□ 0.04
CCL4P13236 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.29■□□□□ 0.04
CCL4P13236 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCL4P13236 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CCL4P13236 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCL4P13236 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.28■□□□□ 0.04
CCL4P13236 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCL4P13236 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
CCL4P13236 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL4P13236 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.28■□□□□ 0.04
CCL4P13236 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.28■□□□□ 0.04
CCL4P13236 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.28■□□□□ 0.04
CCL4P13236 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.28■□□□□ 0.04
CCL4P13236 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.28■□□□□ 0.04
CCL4P13236 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.28■□□□□ 0.04
CCL4P13236 MIR6805-201ENST00000615055 62 ntBASIC15.28■□□□□ 0.04
CCL4P13236 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL4P13236 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.28■□□□□ 0.04
CCL4P13236 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCL4P13236 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCL4P13236 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms