Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHOP08100 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RHOP08100 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.78■□□□□ 0.28
RHOP08100 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.78■□□□□ 0.28
RHOP08100 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.78■□□□□ 0.28
RHOP08100 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHOP08100 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
RHOP08100 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.78■□□□□ 0.28
RHOP08100 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RHOP08100 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.78■□□□□ 0.28
RHOP08100 TMEM261P1-201ENST00000604899 340 ntBASIC16.78■□□□□ 0.28
RHOP08100 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHOP08100 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHOP08100 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHOP08100 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHOP08100 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.78■□□□□ 0.28
RHOP08100 UBALD1-205ENST00000590891 2641 ntBASIC16.78■□□□□ 0.28
RHOP08100 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHOP08100 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RHOP08100 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.78■□□□□ 0.28
RHOP08100 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.78■□□□□ 0.28
RHOP08100 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RHOP08100 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RHOP08100 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RHOP08100 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.77■□□□□ 0.28
RHOP08100 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.77■□□□□ 0.28
RHOP08100 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RHOP08100 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RHOP08100 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.77■□□□□ 0.28
RHOP08100 MIR658-201ENST00000385210 100 ntBASIC16.77■□□□□ 0.28
RHOP08100 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.77■□□□□ 0.28
RHOP08100 TMEM14DP-201ENST00000422205 345 ntBASIC16.77■□□□□ 0.28
RHOP08100 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.77■□□□□ 0.28
RHOP08100 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.77■□□□□ 0.28
RHOP08100 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.77■□□□□ 0.28
RHOP08100 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.77■□□□□ 0.28
RHOP08100 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.77■□□□□ 0.28
RHOP08100 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.77■□□□□ 0.28
RHOP08100 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.77■□□□□ 0.28
RHOP08100 MIR8072-201ENST00000614241 80 ntBASIC16.77■□□□□ 0.28
RHOP08100 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RHOP08100 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHOP08100 CLK3P2-201ENST00000427566 1453 ntBASIC16.77■□□□□ 0.28
RHOP08100 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RHOP08100 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.77■□□□□ 0.27
RHOP08100 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RHOP08100 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.77■□□□□ 0.27
RHOP08100 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RHOP08100 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RHOP08100 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.77■□□□□ 0.27
RHOP08100 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.77■□□□□ 0.27
RHOP08100 Z97205.2-201ENST00000564697 1639 ntBASIC16.77■□□□□ 0.27
RHOP08100 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.77■□□□□ 0.27
RHOP08100 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RHOP08100 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.77■□□□□ 0.27
RHOP08100 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.77■□□□□ 0.27
RHOP08100 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RHOP08100 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
RHOP08100 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
RHOP08100 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 CDC14C-201ENST00000428251 1719 ntBASIC16.76■□□□□ 0.27
RHOP08100 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RHOP08100 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RHOP08100 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
RHOP08100 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RHOP08100 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.76■□□□□ 0.27
RHOP08100 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.76■□□□□ 0.27
RHOP08100 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.76■□□□□ 0.27
RHOP08100 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 AC022210.1-201ENST00000449856 793 ntBASIC16.76■□□□□ 0.27
RHOP08100 AC007389.4-201ENST00000454674 793 ntBASIC16.76■□□□□ 0.27
RHOP08100 POU5F1P6-201ENST00000466990 990 ntBASIC16.76■□□□□ 0.27
RHOP08100 AC104596.2-201ENST00000512793 793 ntBASIC16.76■□□□□ 0.27
RHOP08100 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RHOP08100 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RHOP08100 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.76■□□□□ 0.27
RHOP08100 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
RHOP08100 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHOP08100 AL691432.1-201ENST00000596308 1422 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms