Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.07■□□□□ 0.96
COL5A2P05997 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.07■□□□□ 0.96
COL5A2P05997 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
COL5A2P05997 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 AL121723.1-201ENST00000445194 1519 ntBASIC21.07■□□□□ 0.96
COL5A2P05997 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.07■□□□□ 0.96
COL5A2P05997 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC21.07■□□□□ 0.96
COL5A2P05997 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
COL5A2P05997 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC21.07■□□□□ 0.96
COL5A2P05997 ELK2AP-201ENST00000392510 1007 ntBASIC21.07■□□□□ 0.96
COL5A2P05997 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
COL5A2P05997 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL5A2P05997 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.07■□□□□ 0.96
COL5A2P05997 KRT18P43-201ENST00000469825 1281 ntBASIC21.07■□□□□ 0.96
COL5A2P05997 AC026410.3-201ENST00000514280 936 ntBASIC21.07■□□□□ 0.96
COL5A2P05997 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21.07■□□□□ 0.96
COL5A2P05997 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21.07■□□□□ 0.96
COL5A2P05997 AC107373.2-201ENST00000607735 490 ntBASIC21.07■□□□□ 0.96
COL5A2P05997 AL008638.5-201ENST00000623814 1298 ntBASIC21.07■□□□□ 0.96
COL5A2P05997 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.06■□□□□ 0.96
COL5A2P05997 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.06■□□□□ 0.96
COL5A2P05997 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.06■□□□□ 0.96
COL5A2P05997 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.06■□□□□ 0.96
COL5A2P05997 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
COL5A2P05997 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
COL5A2P05997 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.06■□□□□ 0.96
COL5A2P05997 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.06■□□□□ 0.96
COL5A2P05997 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.06■□□□□ 0.96
COL5A2P05997 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
COL5A2P05997 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL5A2P05997 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL5A2P05997 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.06■□□□□ 0.96
COL5A2P05997 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC21.06■□□□□ 0.96
COL5A2P05997 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC21.06■□□□□ 0.96
COL5A2P05997 AC106872.11-201ENST00000605838 421 ntBASIC21.06■□□□□ 0.96
COL5A2P05997 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.06■□□□□ 0.96
COL5A2P05997 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL5A2P05997 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
COL5A2P05997 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL5A2P05997 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL5A2P05997 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COL5A2P05997 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 C2orf27AP3-201ENST00000434123 579 ntBASIC21.05■□□□□ 0.96
COL5A2P05997 Z93015.1-201ENST00000451718 390 ntBASIC21.05■□□□□ 0.96
COL5A2P05997 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
COL5A2P05997 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.05■□□□□ 0.96
COL5A2P05997 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.05■□□□□ 0.96
COL5A2P05997 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC21.05■□□□□ 0.96
COL5A2P05997 AL354718.3-201ENST00000616414 581 ntBASIC21.05■□□□□ 0.96
COL5A2P05997 CR382287.1-201ENST00000623954 586 ntBASIC21.05■□□□□ 0.96
COL5A2P05997 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.05■□□□□ 0.96
COL5A2P05997 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL5A2P05997 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 AL607033.1-201ENST00000623900 1599 ntBASIC21.04■□□□□ 0.96
COL5A2P05997 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL5A2P05997 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.04■□□□□ 0.96
COL5A2P05997 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms