Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 MIR648-201ENST00000385046 94 ntBASIC16.54■□□□□ 0.24
HLA-DQB2P05538 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 AP000344.2-201ENST00000512987 629 ntBASIC16.54■□□□□ 0.24
HLA-DQB2P05538 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 MIR4321-201ENST00000592276 80 ntBASIC16.54■□□□□ 0.24
HLA-DQB2P05538 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 AC084121.4-201ENST00000641598 221 ntBASIC16.54■□□□□ 0.24
HLA-DQB2P05538 AF228730.8-201ENST00000642140 221 ntBASIC16.54■□□□□ 0.24
HLA-DQB2P05538 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HLA-DQB2P05538 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 AL627223.1-201ENST00000416693 442 ntBASIC16.53■□□□□ 0.24
HLA-DQB2P05538 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 FAM58DP-201ENST00000428076 619 ntBASIC16.53■□□□□ 0.24
HLA-DQB2P05538 AC005237.2-201ENST00000434368 219 ntBASIC16.53■□□□□ 0.24
HLA-DQB2P05538 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 AC134684.3-201ENST00000641758 218 ntBASIC16.53■□□□□ 0.24
HLA-DQB2P05538 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 AC008741.2-201ENST00000612792 3115 ntBASIC16.53■□□□□ 0.24
HLA-DQB2P05538 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 AC010491.1-201ENST00000563101 2797 ntBASIC16.53■□□□□ 0.24
HLA-DQB2P05538 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.53■□□□□ 0.24
HLA-DQB2P05538 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 KRT18P32-201ENST00000424695 1287 ntBASIC16.52■□□□□ 0.24
HLA-DQB2P05538 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 RNA5SP410-201ENST00000516285 106 ntBASIC16.52■□□□□ 0.24
HLA-DQB2P05538 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 AC061975.2-201ENST00000581722 295 ntBASIC16.52■□□□□ 0.24
HLA-DQB2P05538 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.52■□□□□ 0.24
HLA-DQB2P05538 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQB2P05538 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQB2P05538 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.52■□□□□ 0.23
HLA-DQB2P05538 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQB2P05538 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLA-DQB2P05538 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
HLA-DQB2P05538 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.52■□□□□ 0.23
HLA-DQB2P05538 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.51■□□□□ 0.23
HLA-DQB2P05538 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 CDC14C-201ENST00000428251 1719 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms