Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.8■□□□□ 0.44
VTNP04004 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.8■□□□□ 0.44
VTNP04004 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.8■□□□□ 0.44
VTNP04004 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.8■□□□□ 0.44
VTNP04004 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.8■□□□□ 0.44
VTNP04004 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 BTBD7P1-201ENST00000447253 1453 ntBASIC17.8■□□□□ 0.44
VTNP04004 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.8■□□□□ 0.44
VTNP04004 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VTNP04004 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 CYP4F24P-201ENST00000586049 1580 ntBASIC17.79■□□□□ 0.44
VTNP04004 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VTNP04004 AL592424.1-201ENST00000563624 1536 ntBASIC17.79■□□□□ 0.44
VTNP04004 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.79■□□□□ 0.44
VTNP04004 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.79■□□□□ 0.44
VTNP04004 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.79■□□□□ 0.44
VTNP04004 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.79■□□□□ 0.44
VTNP04004 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.79■□□□□ 0.44
VTNP04004 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.79■□□□□ 0.44
VTNP04004 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.79■□□□□ 0.44
VTNP04004 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 AL109936.8-201ENST00000641772 604 ntBASIC17.79■□□□□ 0.44
VTNP04004 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 AD000864.1-201ENST00000624076 2295 ntBASIC17.79■□□□□ 0.44
VTNP04004 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VTNP04004 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VTNP04004 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.79■□□□□ 0.44
VTNP04004 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.78■□□□□ 0.44
VTNP04004 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.78■□□□□ 0.44
VTNP04004 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.78■□□□□ 0.44
VTNP04004 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.78■□□□□ 0.44
VTNP04004 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 REXO1L8P-201ENST00000604378 1897 ntBASIC17.78■□□□□ 0.44
VTNP04004 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.78■□□□□ 0.44
VTNP04004 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
VTNP04004 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VTNP04004 SPDYE19P-201ENST00000338590 713 ntBASIC17.78■□□□□ 0.44
VTNP04004 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
VTNP04004 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.78■□□□□ 0.44
VTNP04004 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.78■□□□□ 0.44
VTNP04004 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.78■□□□□ 0.44
VTNP04004 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 AC027307.3-201ENST00000594262 1100 ntBASIC17.78■□□□□ 0.44
VTNP04004 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VTNP04004 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VTNP04004 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VTNP04004 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.78■□□□□ 0.44
VTNP04004 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VTNP04004 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VTNP04004 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.78■□□□□ 0.44
VTNP04004 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VTNP04004 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.77■□□□□ 0.44
VTNP04004 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms