Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.23■□□□□ 0.35
RTN3O95197 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.23■□□□□ 0.35
RTN3O95197 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RTN3O95197 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTN3O95197 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN3O95197 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.22■□□□□ 0.35
RTN3O95197 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
RTN3O95197 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.22■□□□□ 0.35
RTN3O95197 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.22■□□□□ 0.35
RTN3O95197 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RTN3O95197 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN3O95197 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.22■□□□□ 0.35
RTN3O95197 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.22■□□□□ 0.35
RTN3O95197 RNA5SP410-201ENST00000516285 106 ntBASIC17.22■□□□□ 0.35
RTN3O95197 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.22■□□□□ 0.35
RTN3O95197 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN3O95197 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
RTN3O95197 DUX4L27-201ENST00000554796 1261 ntBASIC17.22■□□□□ 0.35
RTN3O95197 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN3O95197 MIR4453-201ENST00000584019 89 ntBASIC17.22■□□□□ 0.35
RTN3O95197 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.22■□□□□ 0.35
RTN3O95197 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RTN3O95197 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
RTN3O95197 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTN3O95197 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.21■□□□□ 0.35
RTN3O95197 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RTN3O95197 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.21■□□□□ 0.35
RTN3O95197 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RTN3O95197 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RTN3O95197 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 AL353705.2-201ENST00000428243 662 ntBASIC17.21■□□□□ 0.35
RTN3O95197 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.21■□□□□ 0.35
RTN3O95197 AC024267.1-201ENST00000582320 895 ntBASIC17.21■□□□□ 0.35
RTN3O95197 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 AC003101.2-201ENST00000612557 442 ntBASIC17.21■□□□□ 0.35
RTN3O95197 AC007967.4-201ENST00000614700 386 ntBASIC17.21■□□□□ 0.35
RTN3O95197 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.21■□□□□ 0.35
RTN3O95197 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.21■□□□□ 0.35
RTN3O95197 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTN3O95197 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
RTN3O95197 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTN3O95197 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
RTN3O95197 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RTN3O95197 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RTN3O95197 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.21■□□□□ 0.34
RTN3O95197 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.21■□□□□ 0.34
RTN3O95197 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms