Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LDB2O43679 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LDB2O43679 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LDB2O43679 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LDB2O43679 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
LDB2O43679 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
LDB2O43679 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 RPSAP43-201ENST00000402237 625 ntBASIC16.3■□□□□ 0.2
LDB2O43679 GPX1P2-201ENST00000429271 606 ntBASIC16.3■□□□□ 0.2
LDB2O43679 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 AC245100.5-201ENST00000452108 331 ntBASIC16.3■□□□□ 0.2
LDB2O43679 AC112482.1-201ENST00000492080 688 ntBASIC16.3■□□□□ 0.2
LDB2O43679 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.3■□□□□ 0.2
LDB2O43679 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.3■□□□□ 0.2
LDB2O43679 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 MIR4469-201ENST00000583919 79 ntBASIC16.3■□□□□ 0.2
LDB2O43679 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 AL691403.2-201ENST00000618460 490 ntBASIC16.3■□□□□ 0.2
LDB2O43679 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 AC105339.1-204ENST00000636249 355 ntBASIC16.3■□□□□ 0.2
LDB2O43679 AC084121.4-201ENST00000641598 221 ntBASIC16.3■□□□□ 0.2
LDB2O43679 AF228730.8-201ENST00000642140 221 ntBASIC16.3■□□□□ 0.2
LDB2O43679 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LDB2O43679 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.3■□□□□ 0.2
LDB2O43679 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LDB2O43679 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.3■□□□□ 0.2
LDB2O43679 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
LDB2O43679 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.29■□□□□ 0.2
LDB2O43679 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LDB2O43679 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LDB2O43679 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LDB2O43679 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.29■□□□□ 0.2
LDB2O43679 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.29■□□□□ 0.2
LDB2O43679 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.29■□□□□ 0.2
LDB2O43679 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.29■□□□□ 0.2
LDB2O43679 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.29■□□□□ 0.2
LDB2O43679 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.29■□□□□ 0.2
LDB2O43679 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.29■□□□□ 0.2
LDB2O43679 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.29■□□□□ 0.2
LDB2O43679 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 AC069335.1-201ENST00000489972 472 ntBASIC16.29■□□□□ 0.2
LDB2O43679 KRT8P23-201ENST00000560090 1207 ntBASIC16.29■□□□□ 0.2
LDB2O43679 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.29■□□□□ 0.2
LDB2O43679 AC022145.2-201ENST00000598203 171 ntBASIC16.29■□□□□ 0.2
LDB2O43679 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.29■□□□□ 0.2
LDB2O43679 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.29■□□□□ 0.2
LDB2O43679 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.29■□□□□ 0.2
LDB2O43679 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LDB2O43679 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB2O43679 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
LDB2O43679 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.28■□□□□ 0.2
LDB2O43679 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LDB2O43679 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.28■□□□□ 0.2
LDB2O43679 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.28■□□□□ 0.2
LDB2O43679 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms