Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
SLC28A1O00337 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC28A1O00337 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC28A1O00337 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
SLC28A1O00337 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC28A1O00337 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC28A1O00337 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
SLC28A1O00337 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC28A1O00337 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
SLC28A1O00337 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SLC28A1O00337 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC28A1O00337 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SLC28A1O00337 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
SLC28A1O00337 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.74■□□□□ 0.11
SLC28A1O00337 KRT18P34-201ENST00000488218 1270 ntBASIC15.74■□□□□ 0.11
SLC28A1O00337 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.74■□□□□ 0.11
SLC28A1O00337 UNC93B6-202ENST00000528242 690 ntBASIC15.74■□□□□ 0.11
SLC28A1O00337 AP002469.2-201ENST00000531724 424 ntBASIC15.74■□□□□ 0.11
SLC28A1O00337 AC109635.5-201ENST00000533593 962 ntBASIC15.74■□□□□ 0.11
SLC28A1O00337 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SLC28A1O00337 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC28A1O00337 AC096734.2-201ENST00000562054 433 ntBASIC15.74■□□□□ 0.11
SLC28A1O00337 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC28A1O00337 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SLC28A1O00337 MIR7706-201ENST00000613747 67 ntBASIC15.74■□□□□ 0.11
SLC28A1O00337 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC28A1O00337 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC28A1O00337 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SLC28A1O00337 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC28A1O00337 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC28A1O00337 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC28A1O00337 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC28A1O00337 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 AL513477.1-201ENST00000602865 2407 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC28A1O00337 IGLL3P-201ENST00000412472 434 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 AC009947.1-201ENST00000444350 727 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 AC093724.1-201ENST00000448659 1027 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 HCG4B-203ENST00000450128 991 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 AL049840.3-201ENST00000602669 611 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC28A1O00337 AL031008.1-201ENST00000619963 541 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 AC116407.3-201ENST00000623905 1129 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC28A1O00337 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC28A1O00337 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC28A1O00337 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SLC28A1O00337 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
SLC28A1O00337 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 AC068587.6-202ENST00000641839 5619 ntBASIC15.73■□□□□ 0.11
SLC28A1O00337 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC28A1O00337 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC28A1O00337 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms