Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 AC105233.2-201ENST00000523697 349 ntBASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 AF228730.5-201ENST00000530288 346 ntBASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 AC073389.1-201ENST00000595595 795 ntBASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL4A3BPQ9Y5P4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL4A3BPQ9Y5P4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.27■□□□□ 0.51
COL4A3BPQ9Y5P4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.27■□□□□ 0.51
COL4A3BPQ9Y5P4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
COL4A3BPQ9Y5P4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL4A3BPQ9Y5P4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
COL4A3BPQ9Y5P4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
COL4A3BPQ9Y5P4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 AC142381.1-201ENST00000426099 345 ntBASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 SPDYE14P-201ENST00000442619 822 ntBASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 FAM86GP-201ENST00000448322 971 ntBASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 PRYP6-201ENST00000514804 343 ntBASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 AC026150.2-201ENST00000564693 1156 ntBASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 AC015911.4-201ENST00000588022 1070 ntBASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.26■□□□□ 0.51
COL4A3BPQ9Y5P4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms