Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 GAPDHP21-201ENST00000450301 1010 ntBASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 AC004233.3-201ENST00000607794 1269 ntBASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSX2IPQ9Y2D8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 KRT8P39-201ENST00000396270 1433 ntBASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 MRPS18AP1-201ENST00000414458 589 ntBASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SERBP1P5-201ENST00000510079 1181 ntBASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 AP002490.2-201ENST00000524791 560 ntBASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 AC073439.1-201ENST00000624121 1774 ntBASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSX2IPQ9Y2D8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSX2IPQ9Y2D8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms