Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 AC026979.3-201ENST00000607315 403 ntBASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLCF1Q9UBD9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 FAM207CP-201ENST00000443486 507 ntBASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AL079307.3-201ENST00000556114 283 ntBASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AL365330.1-201ENST00000607459 531 ntBASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AC022211.2-201ENST00000585075 2527 ntBASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 AC106886.4-201ENST00000623557 2502 ntBASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLCF1Q9UBD9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 AC236430.1-201ENST00000402231 743 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms