Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 ZNF890P-202ENST00000530367 1156 ntBASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 AL512361.1-201ENST00000554200 418 ntBASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 KRT8P12-202ENST00000472924 1397 ntBASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRIT1Q9P2V4 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 AL139010.1-201ENST00000454878 894 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 RN7SL692P-201ENST00000464677 288 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 AL596325.1-201ENST00000563991 1082 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 AC010336.2-201ENST00000564226 506 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 AL132655.2-201ENST00000596276 594 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 U82695.1-201ENST00000635752 1889 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 NKILA-202ENST00000614771 2598 ntBASIC15.73■□□□□ 0.11
LRIT1Q9P2V4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 AL353779.1-201ENST00000434793 351 ntBASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 AC044860.1-202ENST00000559481 777 ntBASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 AL033527.5-202ENST00000641632 1098 ntBASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRIT1Q9P2V4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms