Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
CALYQ9NYX4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CALYQ9NYX4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 AL022342.1-201ENST00000400363 863 ntBASIC13.54□□□□□ -0.24
CALYQ9NYX4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 LINC02199-201ENST00000506655 2702 ntBASIC13.54□□□□□ -0.24
CALYQ9NYX4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CALYQ9NYX4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.54□□□□□ -0.24
CALYQ9NYX4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 AC008741.2-201ENST00000612792 3115 ntBASIC13.53□□□□□ -0.24
CALYQ9NYX4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 AC023274.1-201ENST00000418278 595 ntBASIC13.53□□□□□ -0.24
CALYQ9NYX4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 KRT18P58-201ENST00000527480 1120 ntBASIC13.53□□□□□ -0.24
CALYQ9NYX4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CALYQ9NYX4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CALYQ9NYX4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 541.4 ms