Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 TOB2P1-201ENST00000469761 992 ntBASIC14.99□□□□□ -0.01
CLN6Q9NWW5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 AL353135.1-201ENST00000606729 504 ntBASIC14.99□□□□□ -0.01
CLN6Q9NWW5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 AC010654.1-201ENST00000615722 808 ntBASIC14.99□□□□□ -0.01
CLN6Q9NWW5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 AC016027.1-202ENST00000607927 1699 ntBASIC14.99□□□□□ -0.01
CLN6Q9NWW5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLN6Q9NWW5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 TMPOP1-202ENST00000424642 1267 ntBASIC14.98□□□□□ -0.01
CLN6Q9NWW5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 LINC02228-204ENST00000642115 2962 ntBASIC14.98□□□□□ -0.01
CLN6Q9NWW5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLN6Q9NWW5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 FAM86EP-206ENST00000510506 987 ntBASIC14.97□□□□□ -0.01
CLN6Q9NWW5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.97□□□□□ -0.01
CLN6Q9NWW5 AC010331.1-201ENST00000611423 582 ntBASIC14.97□□□□□ -0.01
CLN6Q9NWW5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms