Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.86■□□□□ 0.77
ECHDC1Q9NTX5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ECHDC1Q9NTX5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ECHDC1Q9NTX5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 AL139400.1-201ENST00000366220 510 ntBASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 HLA-J-203ENST00000494367 1087 ntBASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC1Q9NTX5 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ECHDC1Q9NTX5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms