Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RTN4Q9NQC3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 LINC00052-201ENST00000560153 1966 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 AC099521.3-201ENST00000624251 2938 ntBASIC19.44■□□□□ 0.7
RTN4Q9NQC3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 AP000523.1-201ENST00000398242 1049 ntBASIC19.44■□□□□ 0.7
RTN4Q9NQC3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 AC090680.1-201ENST00000464696 860 ntBASIC19.44■□□□□ 0.7
RTN4Q9NQC3 GCSHP2-201ENST00000560971 527 ntBASIC19.44■□□□□ 0.7
RTN4Q9NQC3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 MIR4497-201ENST00000583208 89 ntBASIC19.44■□□□□ 0.7
RTN4Q9NQC3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTN4Q9NQC3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC19.43■□□□□ 0.7
RTN4Q9NQC3 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RTN4Q9NQC3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 AL603832.2-201ENST00000566195 2125 ntBASIC19.42■□□□□ 0.7
RTN4Q9NQC3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN4Q9NQC3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms