Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 AL031008.1-201ENST00000619963 541 ntBASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB1Q9H4B7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AL031284.1-201ENST00000419297 478 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 HCG4B-203ENST00000450128 991 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 RNA5SP419-201ENST00000515908 135 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 UNC93B6-202ENST00000528242 690 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AP002469.2-201ENST00000531724 424 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AC104692.2-201ENST00000603054 253 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AC092850.2-201ENST00000623821 2697 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 AC023824.1-201ENST00000562945 2975 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
TUBB1Q9H4B7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AC109635.5-201ENST00000533593 962 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 RN7SL510P-201ENST00000581311 263 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AL009183.1-201ENST00000603760 355 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AL773604.1-201ENST00000617417 272 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AC116407.3-201ENST00000623905 1129 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 AC010507.1-201ENST00000633895 436 ntBASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TUBB1Q9H4B7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms