Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 KRT18P13-201ENST00000400056 1290 ntBASIC14.61□□□□□ -0.07
NELFAQ9H3P2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 MKNK2P1-201ENST00000437526 628 ntBASIC14.61□□□□□ -0.07
NELFAQ9H3P2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 POU5F1P6-201ENST00000466990 990 ntBASIC14.61□□□□□ -0.07
NELFAQ9H3P2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 AC112482.1-201ENST00000492080 688 ntBASIC14.61□□□□□ -0.07
NELFAQ9H3P2 YBX1P5-201ENST00000509441 847 ntBASIC14.61□□□□□ -0.07
NELFAQ9H3P2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 AC092364.2-201ENST00000596710 2692 ntBASIC14.61□□□□□ -0.07
NELFAQ9H3P2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NELFAQ9H3P2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AC002056.1-201ENST00000395613 760 ntBASIC14.6□□□□□ -0.07
NELFAQ9H3P2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AC092474.2-201ENST00000424288 719 ntBASIC14.6□□□□□ -0.07
NELFAQ9H3P2 HTR5BP-201ENST00000430851 1154 ntBASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AC112191.1-201ENST00000523689 701 ntBASIC14.6□□□□□ -0.07
NELFAQ9H3P2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.6□□□□□ -0.07
NELFAQ9H3P2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 DOC2GP-204ENST00000639052 2548 ntBASIC14.6□□□□□ -0.07
NELFAQ9H3P2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NELFAQ9H3P2 MTHFR-217ENST00000641820 1569 ntBASIC14.6□□□□□ -0.07
NELFAQ9H3P2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.59□□□□□ -0.07
NELFAQ9H3P2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NELFAQ9H3P2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NELFAQ9H3P2 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms